In the Be­gin­ning… there were Stro­ma­to­lites

by Gillian Belk

In the be­gin­ning…

Cre­ation sto­ries are in­her­ently imag­i­na­tive and in­ter­est­ing. The three main monothe­is­tic re­li­gions — Ju­daism, Chris­tian­ity, and Is­lam — be­lieve the uni­verse took only six days to cre­ate, Greek mythol­ogy posits that Gaea (Earth) and Uranus (Sky) cre­ated many prog­e­nies whose fight­ing shaped the world. And this is my per­sonal fa­vorite: Nordic mythol­ogy pro­posed that Odin hacked-up a great gi­ant into many pieces, which be­came the uni­verse, skies, and the Earth. Nowa­days we be­lieve that all liv­ing things de­vel­oped in much longer than six days and def­i­nitely not from the forges of Prometheus and his brother Epimetheus. In­stead, we the­o­rize liv­ing things de­velop via evo­lu­tion. Yet, as sci­en­tists, we still mar­vel at the ori­gin of life and con­tinue to hunt for the first traces of life on our Pale Blue Dot.

Fig­ure 1. Stro­ma­to­lite fos­sil from Strel­ley Pool For­ma­tion. (Source)

So, where can we find the first life forms on Earth? Al­though we do not yet know the ex­act mi­crobes that man­aged to spin to­gether some ge­netic in­for­ma­tion and make pro­teins, we do have ev­i­dence of life as far back at 3.5 bil­lion years ago (that's bil­lion with a "b"!) in what are known as stro­ma­to­lites (the term comes from the Greek 'stroma, for layer, and 'lythos', for rock). Stro­ma­to­lites are or­ganic sed­i­men­tary struc­tures con­sist­ing of cal­ci­fied mi­cro­bial biofilms or mats and sed­i­men­tary lay­ers. Over the years, the de­f­i­n­i­tion of stro­ma­to­lites has changed with new dis­cov­er­ies, but at the present, stro­ma­to­lites ap­pear to be de­fined as lay­ers of bac­te­r­ial biofilms. Stro­ma­to­lites fall un­der the blan­ket term of mi­cro­bialites, which in­clude struc­tures that are made from lay­ers of eu­kary­otic and prokary­otic com­mu­ni­ties. Stro­ma­to­lites are seen all over the fos­sil record, in­clud­ing in hy­drother­mal vents at Yel­low­stone Na­tional Park, frozen lakes in Antarc­tica, land locked atolls in the In­dian Ocean, hy­per­saline lakes in West­ern Aus­tralia, sub­ti­dal zones in the Ba­hamas, and hun­dreds of other lo­ca­tions.

Stro­ma­to­lites form in a va­ri­ety of ways, but mostly con­sist of bac­te­ria, es­pe­cially cyanobac­te­ria, which cre­ated a thick slimy biofilm which at­taches to the lo­cal sed­i­ment. When bound to the ex­tra­cel­lu­lar poly­meric sub­stances of the biofilm, the sed­i­ment cal­ci­fies in one of two ways. One is that cal­cium car­bon­ate from the sur­round­ing wa­ter ce­ments the sed­i­ment af­ter the mi­crobes be­gin to grow on it. The other is that the or­gan­isms them­selves se­crete a car­bon­ate that ce­ments both live and dead cells. Over time, these lay­ers ac­cu­mu­late on top of one an­other un­til the stro­ma­to­lites can reach over 2 me­ters in height!

An ex­tra­or­di­nary study by Bid­dana and co-work­ers demon­strates how stro­ma­to­lites form in real time. The team cre­ated time-lapse videos of Os­cil­la­to­ria cyanobac­te­ria from un­der­wa­ter sink­holes in Lake Huron re­spond­ing to dif­fer­ent light, tem­per­a­ture, and de­bris. The cyanobac­te­ria mi­grated to­wards the light, grew bet­ter in warmer tem­per­a­tures, and, sur­pris­ingly, buried the de­bris that fell on the biofilm. In each case, the Os­cil­la­to­ria spread their fil­a­ments and ten­drils to­wards de­sir­able con­di­tions, such as to­wards light sources or up and over de­bris. I was par­tic­u­larly drawn to the bur­ial part of the study be­cause the cyanobac­te­ria cov­ered the shells and rocks com­pletely in a sin­gle, solid layer in as lit­tle as one day! This could ex­plain why, in fos­silized mi­cro­bial mats, the or­ganic lay­ers are al­ways seen in a clear, solid stra­tum, and not in lay­ers of vary­ing thick­nesses — but more on that later. This study was also im­por­tant to me be­cause the en­vi­ron­ment where the cyanobac­te­ria came from, the un­der­wa­ter sink­holes in Lake Huron, po­ten­tially mim­ics an­cient Earth. The ground­wa­ter in the sink­hole pumps wa­ter low in oxy­gen and high in sul­fides, much like in the old Earth.

Fig­ure 2. The Strel­ley Pool For­ma­tion, Pil­bara Cra­ton, West­ern Aus­tralia. (Source)

Com­par­ing mod­ern stro­ma­to­lites to fos­sil ones pro­vides a small win­dow into our very an­cient past. An ex­am­ple is a re­cent find by All­wood and col­leagues at the Strel­ley Pool For­ma­tion in West­ern Aus­tralia, where there is ev­i­dence of 3.5 bil­lion year old stro­ma­to­lite fos­sils. The re­searchers had to prove that traces of life en­dured lit­er­ally bil­lions of years of pres­sure, heat, and ero­sion, and that these were not just not lay­ered rocks like sand­stone. A team led by a group at Cal­tech and the NASA As­tro­bi­ol­ogy In­sti­tute at Jet Propul­sion Lab­o­ra­to­ries looked at one mil­lime­ter light and dark al­ter­nat­ing stri­a­tions in the an­cient Aus­tralian stro­ma­to­lites. The re­searchers ar­gue that these dark lines are 3.5 bil­lion-year-old re­mains of an Early Archean Reef. They ex­plain that the dark lines have a con­sis­tent width through­out the rock for­ma­tion that re­sem­bles that of other an­cient and mod­ern stro­ma­to­lites. Ad­di­tion­ally, the team used Ra­man spec­troscopy to de­tect in­elas­tic scat­ter­ing of mono­chrome light via a laser to de­tect the struc­tural com­po­si­tion of mol­e­cules. This prove that the mol­e­cules in the black lines are or­ganic in ori­gin. Ad­di­tion­ally, Ra­man spec­troscopy re­vealed that the black or­ganic lines were sub­ject to the same heat and pres­sure as the sur­round­ing rock there­fore con­firm­ing the or­ganic mat­ter could not have come from other sources.

The pic­ture of life on Earth bil­lions of years ago is now a lit­tle clearer. Cyanobac­te­ria lived and worked to­gether in mi­cro­bial mats in the seas around Earth, hap­pily turn­ing sun­shine and car­bon into en­ergy. But what other in­sights could the fos­silized stro­ma­to­lites give us? For starters, their ex­is­tence is an ex­am­ple to how life on other plan­ets may look or evolved. Life this an­cient in Earth's his­tory also means their en­vi­ron­ment was oxy­gen poor and there­fore ex­pands our per­cep­tions of what is or is not a hos­pitable planet. Ad­di­tion­ally, the fos­silized re­mains of stro­ma­to­lites could prove more im­me­di­ately the ex­is­tence of life on our near­est neigh­bor, Mars. If we were to find rock for­ma­tions with dark and light re­peat­ing lay­ers like those in Aus­tralia, we may be able to prove the ex­is­tence of stro­ma­to­lites and there­fore signs of an­cient mi­cro­bial life on the Red Planet.

Many ques­tions re­main. For ex­am­ple, did cyanobac­te­ria make the old­est stro­ma­to­lites? This is still hotly de­bated. Also de­bated it whether or not the ori­gins of the most an­cient stro­ma­to­lites are bi­otic. How­ever, it is be­com­ing clearer that when we ven­ture to new plan­ets we prob­a­bly won't en­counter lit­tle green men, but we will more likely run into beau­ti­ful mi­crobes hard at work.

 

Gillian Belk

Gillian Belk is a grad­u­ate stu­dent in Rachel Dutton's lab at UCSD.

 

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