Links to our books and a few other writ­ings, a cou­ple of lec­tures, and an on­line course…

Image
2016

In The Com­pany of Mi­crobes ‑Ten Years of Small Things Con­sid­ered

A col­lec­tion of posts from STC and printed in 2016 to mark the tenth an­niver­sary of the blog:"In the Com­pany of Mi­crobes is a care­fully se­lected trea­sure chest of wise, amus­ing, and even pro­found state­ments about the ubiq­uity and rel­e­vance of the mi­cro­bial world. Schaechter, past ASM Pres­i­dents, and dis­tin­guished mi­cro­bi­ol­o­gists from around the globe re­flect on per­sonal, some­times his­toric in­ter­ac­tions with mi­crobes and un­ex­pected dis­cov­er­ies, each es­say con­vey­ing the ex­cite­ment and sense of sur­prise that mi­cro­bi­ol­ogy holds for them. This is the rea­son that Small Things Con­sid­ered is a sci­en­tific and so­cial me­dia phe­nom­e­non that has im­pacted sci­en­tists at every stage of their ca­reers and shared the magic of mi­crobes with the world."

Elio Schaechter, ed­i­tor – 2016

Image
2017

Life at the Edge of Sight: A Pho­to­graphic Ex­plo­ration of the Mi­cro­bial World

" Life at the Edge of Sight opens a beau­ti­ful new fron­tier for read­ers to ex­plore through words and im­ages. We learn that there is more mi­cro­bial bio­di­ver­sity on a sin­gle frond of duck­weed float­ing in a Delft canal than the di­ver­sity of plants and an­i­mals that bi­ol­o­gists find in trop­i­cal rain­forests. Colonies with mil­lions of mi­crobes can pro­duce an ar­ray of pig­ments that put an artist's palette to shame. The mi­cro­bial world is an­cient and ever-chang­ing. All other or­gan­isms have evolved within this uni­verse of mi­crobes, yield­ing in­tri­cate ben­e­fi­cial sym­bioses. With two ex­perts as guides, the in­vis­i­ble mi­cro­bial world awaits in plain sight."

Scott Chim­i­leski and Roberto Kolter – 2017

Image
2012

Mi­crobes and Evo­lu­tion: The World That Dar­win Never Saw

"In­spired by a 2009 col­lo­quium on mi­cro­bial evo­lu­tion con­vened at the Gala­pa­gos Is­lands, Mi­crobes and Evo­lu­tion con­tin­ues to cel­e­brate Charles Dar­win and his land­mark book On the Ori­gin of Species. Fea­tures 40 first-per­son es­says writ­ten by mi­cro­bi­ol­o­gists with a pas­sion for evo­lu­tion­ary bi­ol­ogy, whose think­ing and ca­reer paths in sci­ence were in­flu­enced by Dar­win s sem­i­nal work. In­cludes per­sonal view­points on the im­por­tance of evo­lu­tion­ary prin­ci­ples in the study of a va­ri­ety of as­pects of life sci­ence, from tax­on­omy, spe­ci­a­tion, adap­ta­tion, so­cial struc­ture, and sym­bio­sis to an­tibi­otic re­sis­tance, ge­net­ics, and ge­nomics."

Roberto Kolter and Stan­ley Mal­ory, ed­i­tors – 2012

Image
1997

In the Com­pany of Mush­rooms: A Biologist's Tale

"We might slice them into a salad, sa­vor them in a sauce, won­der at their power to in­tox­i­cate or poi­son, mar­vel at their mul­ti­far­i­ous pres­ence in the forest–but few of us re­al­ize that mush­rooms, humbly thriv­ing on de­cay, are cru­cial to life on Earth as we know it. In this book a dis­tin­guished bi­ol­o­gist, long in­trigued by the se­cret life of fungi, re­veals the power of these cu­ri­ous organisms–not quite an­i­mal, not quite plant–to en­chant and in­struct, to nour­ish and make way for all sorts of su­pe­rior forms of na­ture. In a style at once learned and quirky, per­sonal and com­mand­ing, Elio Schaechter im­parts the fas­ci­nat­ing minu­tiae and the weighty im­pli­ca­tions of his subject–a pri­mar­ily mi­cro­scopic life form that nonethe­less ac­counts for up to two tons of mat­ter for every hu­man on the planet. He shows us how fungi, the great de­com­posers, re­cy­cle most of the world's veg­etable mat­ter – from a blade of grass to a strap­ping tree – and thus pre­vent us from sink­ing un­der ever-ac­cu­mu­lat­ing masses of de­cay­ing mat­ter."

Elio Schaechter – 1997

Image
2016

Elio's Mem­oirs

"In one's cre­pus­cu­lar (now, that's a word I've never used be­fore) phase of life, writ­ing mem­oirs seems manda­tory. Ac­tu­ally, I wrote these some ten years ago, but I was al­ready reach­ing old age then. My apolo­gia pro la­bore mea re­lies on my be­lief that my first twenty or so years of life were a bit un­usual, al­though far from unique—most of my fel­low young es­capees from Eu­rope had sim­i­lar jour­neys. But this is my story, the one I can best write about."

Click on Elio's Mem­oirs to down­load the PDF (14 MB).

Image
2017

Won­ders of the Mi­cro­bial World

"In this lec­ture, Scott Chim­i­leski and Roberto Kolter share their fas­ci­na­tion with the won­ders of the mi­cro­bial world through vi­gnettes and im­ages from their book, Life at the Edge of Sight: A Pho­to­graphic Ex­plo­ration of the Mi­cro­bial World (Har­vard Uni­ver­sity Press). Their pre­sen­ta­tion fea­tures a stun­ning vi­sual ex­plo­ration of mi­crobes, from the pi­o­neer­ing find­ings of a sev­en­teenth-cen­tury vi­sion­ary to mag­nif­i­cent close-ups of the in­ner work­ings and co­op­er­a­tive com­mu­ni­ties of Earth's most prolific—but of­ten invisible—organisms."

Scott Chim­i­leski and Roberto Kolter, In­tro­duc­tion by Jon Clardy

(Oc­to­ber 19, 2017 at Har­vard Mu­seum of Nat­ural His­tory)

Image
2017

Mi­cro­bial Life, A Uni­verse at the Edge of Sight

"Al­though largely in­vis­i­ble, mi­crobes are ubiq­ui­tous and have a pro­found in­flu­ence on daily life. Us­ing the fa­mil­iar en­vi­ron­ment of our homes as a ba­sis for their talk, Roberto Kolter and Scott Chim­i­leski will guide the au­di­ence through a tour of the re­mark­able mi­cro­bial uni­verse, from "in­vis­i­ble chefs" in­stru­men­tal in prepar­ing many of our fa­vorite foods, to mi­crobes that in­habit our bod­ies and help keep us healthy. In con­sid­er­ing the role mi­crobes play in shap­ing both hu­man life and the nat­ural his­tory of the planet, this lec­ture will in­tro­duce the new Mi­cro­bial Life ex­hi­bi­tion open­ing to the pub­lic Sat­ur­day, Feb­ru­ary 17. Pro­gram at­ten­dees are wel­come to visit the mu­seum gal­leries af­ter the lec­ture for a sneak pre­view of the ex­hibit."

Roberto Kolter and Scott Chim­i­leski (In­tro­duc­tion by Jane Pick­er­ing)

(Feb­ru­ary 15, 2018 at Har­vard Mu­seum of Nat­ural His­tory)

Food Fer­men­ta­tion: The Sci­ence of Cook­ing with Mi­crobes

"Ex­plore the roles that mi­crobes play in the pro­duc­tion, preser­va­tion, and en­hance­ment of di­verse foods in a va­ri­ety of culi­nary tra­di­tions, and learn about the his­tory of food fer­men­ta­tions."

Pia Sorensen and Roberto Kolter

(Free, self-paced, on­line course from Har­vardX)

2021

The His­tory of Mi­cro­bi­ol­ogy – A Per­sonal In­ter­pre­ta­tion

"Mi­cro­bi­ol­ogy be­gan as a uni­fied sci­ence us­ing the prin­ci­ples of chem­istry to un­der­stand liv­ing sys­tems. The uni­fied view quickly split into the sub­dis­ci­plines of med­ical mi­cro­bi­ol­ogy, mol­e­c­u­lar bi­ol­ogy, and en­vi­ron­men­tal mi­cro­bi­ol­ogy. The ad­vent of a uni­ver­sal phy­logeny and cul­ture-in­de­pen­dent ap­proaches has helped tear down the bound­aries sep­a­rat­ing the sub­dis­ci­plines. The vi­sion for the fu­ture is that the study of the fun­da­men­tal roles of mi­crobes in ecol­ogy and evo­lu­tion will lead to an in­te­grated bi­ol­ogy with no bound­ary be­tween mi­cro­bi­ol­ogy and mac­ro­bi­ol­ogy."

Roberto Kolter – 2021

(An­nual Re­view of Mi­cro­bi­ol­ogy 71:1–17)

Image
2021

Bac­te­ria grow swiftly and live thriftily

"Bac­te­ria have evolved nu­mer­ous strate­gies to use re­sources ef­fi­ciently. How­ever, bac­te­r­ial economies de­pend on both the phys­i­o­log­i­cal con­text of the or­gan­isms as well as their growth state — whether they are grow­ing, non-grow­ing or reini­ti­at­ing growth. In this es­say, we dis­cuss some of the fea­tures that make bac­te­ria ef­fi­cient un­der these dif­fer­ent con­di­tions and dur­ing the tran­si­tions be­tween them. We also high­light the many out­stand­ing ques­tions re­gard­ing the phys­i­ol­ogy of non-grow­ing bac­te­r­ial cells. Lastly, we ex­am­ine how ef­fi­ciency is ap­par­ent in both the mode and tempo of bac­te­r­ial evo­lu­tion."

Roberto Kolter, Nathalie Bal­a­ban & Thomas Ju­lou – 2022

(Cur­rent Bi­ol­ogy 32:PR599-R605)

 

2017

Think­ing Like a Phage

"Our world is pop­u­lated by un­told num­bers of crea­tures, but none are more abun­dant than the viruses that in­fect bac­te­ria: the phages. This un­seen realm plays a huge role in every ecosys­tem, yet its very ex­is­tence is nearly uni­ver­sally un­no­ticed. It badly needs an ad­vo­cate, and none serve bet­ter than Merry Youle…Be pre­pared to en­ter a splen­did gar­den and view Na­ture at its most in­ge­nious."

—Elio Schaechter

"TLAP  is a fas­ci­nat­ing, well-re­searched, and highly read­able ac­count of all things phagey, suited to a broad au­di­ence of life sci­ence en­thu­si­asts. Best of all, Youle is plan­ning a se­quel, Phage in Com­mu­nity , to ex­plore the role of phages in a larger, eco­log­i­cal con­text: "It is only at the com­mu­nity level that the es­sen­tial ser­vices pro­vided by the phages be­come dra­mat­i­cally ap­par­ent." Phages have found a wor­thy and knowl­edge­able ad­vo­cate – and friend – in Merry Youle."
—Jamie Henzy, A Star-Stud­ded Phan­tas­tic Voy­age of Phages

by Merry Youle, il­lus­tra­tions by Leah L Pan­téa – Wholon, 2017

(ISBN: 978–0‑9904943–1‑7)